rs1016110 chr22:42440331 A>C
- Sequence
agggaagtcactgttttaaggtga[A/C]gtggccagtggaggtggggctagg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) macrophages form periferal blood
- ASB for transcription factors
- ELF1_HUMAN ZN143_HUMAN IKZF1_HUMAN SPI1_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ELF1_HUMAN | -1.74 | 2.05 | 1.00 | n/a | No Hit | |||
| ZN143_HUMAN | -2.66 | 2.57 | 1.00 | n/a | No Hit | |||
| IKZF1_HUMAN | -1.95 | 1.16 | 1.61 | n/a | n/a | |||
| SPI1_HUMAN | 0.42 | 1.00 | 1.69 | -4.50 | Discordant |
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Motif analysis
