rs10162495 chr14:34138258 T>C

Sequence
cacagagtcaggaagcacttgtca[T/C]tgtggccactttagccactcgccc
ASB in cell types
breast tumor 22RV1 (prostate carcinoma)
ASB for transcription factors
ANDR_HUMAN ESR1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 3.46 n/a 4.0·10-41.00 2.00 n/a No Hit
ESR1_HUMAN 2.98 0.54 0.020.98 1.83 0.94 Weak Discordant
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Motif analysis

ESR1_HUMAN Weak Discordant
ESR1_HUMAN pic

Genetic associations

GRASP advanced age-related macular degeneration (geographic atrophy),  alzheimers disease,  parkinsons disease

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