rs10164204 chr18:21682868 A>G

Sequence
gtactatctgtctacgagattcct[A/G]aagggctggattgaatgagaaaac
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line) CD14+ monocytes
ASB for transcription factors
STAT1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN 1.79 -0.44 0.021.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (geographic atrophy) hdl cholesterol height
GTEx eQTL Adipose_Subcutaneous Cells_Cultured_fibroblasts Esophagus_Mucosa Esophagus_Muscularis Heart_Left_Ventricle Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Thyroid Whole_Blood

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