rs10165271 chr2:40360843 G>C
- Sequence
cttgccattggtccagcaccctct[G/C]ctggggccacacagtgttgtggtt
- ASB in cell types
- SUM159PT (Triple negative breast cancer) 697 (B acute lymphoblastic leukemia with t(1;19)(q23;p13.3) E2A-PBX1 (TCF3-PBX1))
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.85 | -0.14 | 1.39 | -3.08 | Concordant |
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Motif analysis
