rs10165273 chr2:172462163 G>T
- Sequence
ctttaccttacctttcggtgatgg[G/T]ttctgccaccttatcgcggtgggt
- ASB in cell types
- A549 (lung carcinoma) breast tumor GM19239 (male B-cells lymphoblastoid cell line)
- ASB for transcription factors
- SMC3_HUMAN ESR1_HUMAN STAG1_HUMAN RAD21_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMC3_HUMAN | 0.97 | 0.35 | 1.86 | n/a | n/a | |||
| ESR1_HUMAN | 2.60 | n/a | 2.00 | n/a | No Hit | |||
| STAG1_HUMAN | -0.37 | 0.59 | 1.06 | n/a | n/a | |||
| RAD21_HUMAN | 0.87 | 0.36 | 1.91 | n/a | n/a |
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