rs10165678 chr2:30223702 G>A
- Sequence
gtgggtgcctggggcgcattgaag[G/A]gaagtgtgaaacaagaggggttag
- ASB in cell types
- CTV-1 (Adult T acute lymphoblastic leukemia) monocyte-derived dendritic cells THP-1 (acute monocytic leukemia) monocytes from periferal blood
- ASB for transcription factors
- SPI1_HUMAN ETS1_HUMAN FLI1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 1.62 | 0.32 | 1.39 | -2.37 | Concordant | |||
| ETS1_HUMAN | 3.14 | -2.94 | 1.00 | n/a | No Hit | |||
| FLI1_HUMAN | 2.24 | -2.06 | 1.00 | n/a | No Hit |
Items per page:
1 – 3 of 3
Motif analysis
Genetic associations
GRASP diabetic retinopathy in type 2 diabetes mellitus, ldl cholesterol, mitral annular calcium, rheumatoid arthritis