rs10172069 chr2:151288588 C>T
- Sequence
agtgtgtgtgtgtgtgtgtgtgtg[C/T]gcgcgcgcgcgcgttcctatgtgt
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- ZBT40_HUMAN NR2C1_HUMAN KAISO_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZBT40_HUMAN | 1.73 | -1.27 | 1.00 | n/a | No Hit | |||
| NR2C1_HUMAN | 1.04 | -0.21 | 1.00 | n/a | No Hit | |||
| KAISO_HUMAN | 2.59 | -0.47 | 1.00 | n/a | No Hit |
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