rs10173492 chr2:11345331 G>A
- Sequence
gctttccagccgcaggccttcgcg[G/A]ggtcttctccttttggggggcgga
- ASB in cell types
- BEAS-2B (bronchial epithelium) A549 (lung carcinoma) 22RV1 (prostate carcinoma) primary human epidermal keratinocytes
- ASB for transcription factors
- GCR_HUMAN ANDR_HUMAN JUN_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | 0.35 | 1.48 | 1.09 | n/a | No Hit | |||
| ANDR_HUMAN | -2.26 | 3.06 | 2.00 | n/a | No Hit | |||
| JUN_HUMAN | -0.28 | 0.89 | 1.47 | n/a | No Hit |
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