rs10173700 chr2:35872004 T>C
- Sequence
gaatcaaaatgccaacctcatgaa[T/C]tctaatgtccagaataacctaatt
- ASB in cell types
- GM19239 (male B-cells lymphoblastoid cell line)
- ASB for transcription factors
- STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | 0.35 | 1.86 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP aortic valve calcium, cognitive response to topiramate treatment as measured by the animals cognitive test, hdl cholesterol, hip bone mineral density (bmd), hypertension (early onset hypertension), total cholesterol, triglycerides