rs10174981 chr2:175373631 C>G

Sequence
ccaagaaaaaaatccggaaggaaa[C/G]gagctctgttctcaagcttctggg
ASB in cell types
22RV1 (prostate carcinoma)
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
22RV1 (prostate carcinoma) 3.54 n/a 2.2·10-41.00 2.00
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Motif analysis

No data available

Genetic associations

GRASP 2 hour glucose,  homa-b,  obesity with early age of onset (age >2)
GTEx eQTL Adipose_Subcutaneous,  Artery_Tibial,  Colon_Sigmoid,  Esophagus_Gastroesophageal_Junction,  Esophagus_Mucosa,  Esophagus_Muscularis,  Heart_Left_Ventricle,  Lung,  Muscle_Skeletal,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Testis,  Thyroid

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