rs10179305 chr2:235051573 G>A
- Sequence
aagacacagtagaaagttcttgca[G/A]ctttgacgtgggagcagtcccacc
- ASB in cell types
- ICN12 (primary pre-B acute lymphomablastic leukemia) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- PBX1_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| PBX1_HUMAN | 2.88 | -4.79 | 1.50 | n/a | No Hit | |||
| ANDR_HUMAN | 2.30 | -4.69 | 2.50 | 1.43 | Weak Discordant |
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Motif analysis
