rs10179397 chr2:26412460 A>C
- Sequence
aggcagtactggtagcccttatgg[A/C]cactgtgtgccagaggagagagca
- ASB in cell types
- HepG2 (hepatoblastoma)
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| HepG2 (hepatoblastoma) | -0.72 | 1.62 | 2.00 |
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Motif analysis
No data available
Genetic associations
GRASP ldl cholesterol change with statins, paclitaxel-induced cytotoxicity in lymphoblastoid cell lines, total cholesterol
GTEx eQTL Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Brain_Caudate_basal_ganglia, Brain_Hypothalamus, Brain_Nucleus_accumbens_basal_ganglia, Brain_Putamen_basal_ganglia, Breast_Mammary_Tissue, Colon_Sigmoid, Lung, Nerve_Tibial, Pancreas, Testis