rs10182197 chr2:149040580 C>G
- Sequence
caaaacagaaccaagccatctcag[C/G]agacagggagaggtttacacaaca
- ASB in cell types
- GM19239 (male B-cells lymphoblastoid cell line) GM19193 (female B-cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.35 | 1.18 | 1.66 | n/a | No Hit | |||
| STAG1_HUMAN | 0.15 | 1.36 | 1.08 | n/a | n/a |
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