rs10184689 chr2:170395197 T>C
- Sequence
ggagtcttccactaataatgatga[T/C]gactccttgtggagggctggggga
- ASB in cell types
- GM19238 (female B-cells lymphoblastoid cell lines) GM19099 (female B-cells Lymphoblastoid Cell Lines) LNCaP (prostate carcinoma) GM02630 (Fanconi anemi)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.95 | 2.53 | 1.51 | 0.97 | Weak Concordant |
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Motif analysis
