rs10186133 chr2:113079367 G>T
- Sequence
aattctagggagaggtacacttta[G/T]gtcttatccactatttacatctca
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) MCF7 WS8 cells MCF7 TamR (invasive ductal breast carcinoma Tamoxifen resistant) MCF10A (breast epithelial cells)
- ASB for transcription factors
- ESR1_HUMAN FOXA1_HUMAN TEAD4_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 1.27 | 0.26 | 1.79 | n/a | No Hit | |||
| FOXA1_HUMAN | 1.36 | 0.20 | 1.67 | n/a | No Hit | |||
| TEAD4_HUMAN | 2.35 | -2.03 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP adiponectin levels, coronary artery disease (cad), il1ra, ldl cholesterol, tetrology of fallot, total cholesterol
GTEx eQTL Artery_Tibial, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Mucosa, Esophagus_Muscularis, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid