rs10186656 chr2:151619424 T>G
- Sequence
cacgtttcagatccgcttttaaca[T/G]gcagagctaacatcaaggaaactt
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- ATF2_HUMAN SPI1_HUMAN IKZF2_HUMAN EP400_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF2_HUMAN | -1.84 | 1.47 | 1.00 | n/a | No Hit | |||
| SPI1_HUMAN | 3.50 | 0.04 | 1.17 | n/a | No Hit | |||
| IKZF2_HUMAN | -2.67 | 2.91 | 1.00 | n/a | n/a | |||
| EP400_HUMAN | -2.55 | 2.79 | 1.00 | n/a | n/a | |||
| CTBP1_HUMAN | -1.81 | 2.14 | 1.00 | n/a | n/a |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Aorta, Artery_Coronary, Artery_Tibial, Brain_Caudate_basal_ganglia, Brain_Cortex, Brain_Hypothalamus, Brain_Nucleus_accumbens_basal_ganglia, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Left_Ventricle, Liver, Lung, Muscle_Skeletal, Nerve_Tibial, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid, Whole_Blood