rs10187060 chr2:189441060 C>G

Sequence
aactcaacgctgcgaccgagaaaa[C/G]cagggacgcgagaggctcgcgtca
ASB in cell types
HepG2 (hepatoblastoma) fetal bone marrow-derived mononuclear cells HEK293 (embryonic kidney) liver
ASB for transcription factors
KMT2A_HUMAN ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
KMT2A_HUMAN -4.45 2.66 1.005.2·10-3 1.50 n/a No Hit
ANDR_HUMAN -0.23 2.75 1.000.03 1.88 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP diabetic retinopathy in type 2 diabetes mellitus,  infant head circumference
GTEx eQTL Cells_Cultured_fibroblasts,  Esophagus_Muscularis,  Muscle_Skeletal,  Pituitary,  Skin_Sun_Exposed_Lower_leg,  Testis

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