rs10192998 chr2:85921493 A>C
- Sequence
ttttctctaaggttttgccaagac[A/C]aacagagtagttcaggatgcctct
- ASB in cell types
- liver 22RV1 (prostate carcinoma)
- ASB for transcription factors
- RAD21_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | 2.79 | -2.86 | 1.00 | n/a | n/a | |||
| ANDR_HUMAN | 3.25 | n/a | 2.00 | -2.85 | Concordant |
Items per page:
1 – 2 of 2
Motif analysis
Genetic associations
GTEx eQTL Adrenal_Gland, Brain_Caudate_basal_ganglia, Brain_Putamen_basal_ganglia, Brain_Spinal_cord_cervical_c-1, Esophagus_Mucosa, Esophagus_Muscularis, Liver, Muscle_Skeletal, Nerve_Tibial, Thyroid, Whole_Blood