rs10193851 chr2:20145953 C>T
- Sequence
agctgggacagccaagtcccaggg[C/T]aagggcaccaggggacatggagga
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- ZN592_HUMAN ELF1_HUMAN IKZF1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN592_HUMAN | 3.12 | n/a | 1.00 | n/a | n/a | |||
| ELF1_HUMAN | 2.51 | -0.43 | 1.00 | n/a | No Hit | |||
| IKZF1_HUMAN | 1.30 | -1.37 | 1.25 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP obesity with early age of onset (age >2), systolic blood pressure (sbp), total cholesterol, triglycerides