rs10194227 chr2:216517041 G>A

Sequence
tgagggcatatataaaatggatac[G/A]agcctgtgtaaaattacagtttag
ASB in cell types
tibial artery

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
tibial artery 1.90 -1.63 0.021.00 1.00
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Motif analysis

No data available

Genetic associations

GRASP childhood acute lymphoblastic leukemia,  infant head circumference,  ldl cholesterol change with statins,  total cholesterol change with statins
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Adrenal_Gland,  Artery_Aorta,  Artery_Tibial,  Brain_Cortex,  Breast_Mammary_Tissue,  Cells_Cultured_fibroblasts,  Cells_EBV-transformed_lymphocytes,  Colon_Sigmoid,  Colon_Transverse,  Esophagus_Gastroesophageal_Junction,  Esophagus_Muscularis,  Heart_Left_Ventricle,  Lung,  Nerve_Tibial,  Pancreas,  Prostate,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Spleen,  Stomach,  Testis,  Thyroid,  Whole_Blood

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