rs10194421 chr2:209391139 A>G
- Sequence
atttgtttggttaataataaaacc[A/G]tataagaaggcattattcttatca
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN TLE3_HUMAN HXB13_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -0.04 | 1.77 | 2.00 | n/a | No Hit | |||
| TLE3_HUMAN | -0.81 | 2.96 | 2.00 | n/a | n/a | |||
| HXB13_HUMAN | -1.24 | 2.19 | 2.00 | n/a | No Hit | |||
| ANDR_HUMAN | -0.23 | 1.60 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Cells_Cultured_fibroblasts, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Lung, Nerve_Tibial, Thyroid