rs10196200 chr2:230985525 C>T
- Sequence
aggcgaccccttaagggactgctg[C/T]caccaagaggaatactggggtgag
- ASB in cell types
- GM18486 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 3.30 | -4.84 | 1.33 | -3.20 | Concordant | |||
| STAG1_HUMAN | 3.68 | 0.01 | 1.17 | n/a | n/a |
Items per page:
1 – 2 of 2
Motif analysis
