rs10198718 chr2:12106385 C>A
- Sequence
aaagaaagaaaagaaaaatgttgt[C/A]tccgatgacttgttcccagggagg
- ASB in cell types
- K562 (myelogenous leukemia) SEM (childhood B acute lymphoblastic leukemia) HEK293 (embryonic kidney) MOLM14 (Adult acute myeloid leukemia)
- ASB for transcription factors
- ERG_HUMAN ZIC2_HUMAN CDK8_HUMAN LMBL2_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ERG_HUMAN | -4.29 | 2.97 | 1.33 | n/a | No Hit | |||
| ZIC2_HUMAN | 2.54 | -3.91 | 1.33 | n/a | No Hit | |||
| CDK8_HUMAN | 1.87 | -1.40 | 1.00 | n/a | n/a | |||
| LMBL2_HUMAN | 2.69 | -5.02 | 2.00 | n/a | n/a | |||
| CDN1B_HUMAN | -0.11 | 0.81 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP fasting insulin, homa-ir, ldl cholesterol, triglycerides, urinary albumin-to-creatinine ratio, waist hip ratio