rs10199415 chr2:113979420 G>A

Sequence
ccgagctgaaaaagacagtctcca[G/A]gtaggataatccgtcacactagat
ASB in cell types
GM12891 (male B- cells lymphoblastoid cell line)
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.41 2.24 1.008.7·10-3 1.31 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP parkinsons disease,  systolic blood pressure (sbp),  total cholesterol change with statins
GTEx eQTL Artery_Tibial,  Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Esophagus_Muscularis,  Nerve_Tibial,  Skin_Sun_Exposed_Lower_leg,  Spleen,  Testis,  Thyroid

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