rs10200099 chr2:56338418 T>A
- Sequence
ttgaaaaaggacaaaaaagggaaa[T/A]agcagcatggggaagggggttgca
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) CTV-1 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- IKZF1_HUMAN MEF2B_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | 1.96 | -1.21 | 1.25 | n/a | n/a | |||
| MEF2B_HUMAN | 2.29 | -0.10 | 1.25 | 0.72 | Weak Discordant |
Items per page:
1 – 2 of 2
Motif analysis
