rs10201575 chr2:227864239 G>A
- Sequence
aaatcaaattgagcatgtggacaa[G/A]gtgttcttcactgggtgaggcttt
- ASB in cell types
- MDA-MB-231 (breast adenocarcinoma) tibial nerve
- ASB for transcription factors
- GCR_HUMAN EP300_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | -2.51 | 2.91 | 1.00 | 1.81 | Weak Concordant | |||
| EP300_HUMAN | -1.20 | 1.96 | 1.42 | n/a | n/a |
Items per page:
1 – 2 of 2
Motif analysis
