rs10203777 chr2:141835124 T>C
- Sequence
tctacatgatgagtcaaagcaatg[T/C]acacattaagtggggtcagcaaaa
- ASB in cell types
- VCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.58 | 0.40 | 2.00 | -1.76 | Weak Concordant |
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Motif analysis
Genetic associations
GRASP acute lung injury following major trauma, adult asthma, coronary artery disease (cad), eye color, serum creatinine