rs10206089 chr2:61476184 G>A
- Sequence
ttgtatcttatgggatggatattt[G/A]gtgatttgttatgagcaaattgat
- ASB in cell types
- HEK293 (embryonic kidney) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- ESR1_HUMAN ZN366_HUMAN ZN189_HUMAN SPT5H_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 4.14 | -4.79 | 1.00 | n/a | No Hit | |||
| ZN366_HUMAN | 3.77 | n/a | 1.00 | n/a | n/a | |||
| ZN189_HUMAN | 2.82 | n/a | 1.00 | n/a | No Hit | |||
| SPT5H_HUMAN | 1.65 | 0.18 | 1.33 | n/a | n/a | |||
| P53_HUMAN | 3.00 | 0.94 | 1.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
EMBL-EBI granulocyte count, myeloid white cell count, sum neutrophil eosinophil counts, white blood cell count