rs10206453 chr2:23488002 A>G

Sequence
ccccttctagccttttaacctcct[A/G]cggccagtgatgtggtcaggactg
ASB in cell types
BEAS-2B (bronchial epithelium) SYO-1(Biphasic synovial sarcoma)
ASB for transcription factors
GCR_HUMAN SSXT_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GCR_HUMAN -0.07 2.78 1.004.6·10-15 1.00 n/a No Hit
SSXT_HUMAN 0.21 1.71 1.000.05 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP ldl cholesterol change with statins obesity with early age of onset (age >2) total cholesterol change with statins
GTEx eQTL Esophagus_Muscularis

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