rs10208080 chr2:42879816 C>T

Sequence
agtccatcttcattttgggacaat[C/T]ggagaaggcttcctggaggctgag
ASB in cell types
HUVEC-C (HUVEC, umbilical vein endothelial cells)
ASB for transcription factors
TF65_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TF65_HUMAN 2.37 n/a 6.1·10-61.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP diastolic blood pressure (dbp),  mitral annular calcium,  obesity with early age of onset (age >2),  rheumatoid arthritis,  sporadic creutzfeldt-jakob disease,  systolic blood pressure (sbp)
GTEx eQTL Nerve_Tibial,  Pancreas

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