rs10209690 chr2:120564254 C>T

Sequence
ggggggcagaacctgcactccaac[C/T]gccagcccagcgggcgacccctgg
ASB in cell types
HS-SY-2(Monophasic synovial sarcoma)
ASB for transcription factors
SMCA4_HUMAN KDM2B_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMCA4_HUMAN n/a 2.47 1.001.6·10-3 3.00 n/a n/a
KDM2B_HUMAN -0.27 2.78 0.860.02 3.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous Breast_Mammary_Tissue Skin_Sun_Exposed_Lower_leg Testis

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