rs10211565 chr2:142131585 C>A
- Sequence
agaaacagaaagcaaaacaacccc[C/A]aaagtcattaaccgttgcgtaaga
- ASB in cell types
- AsPC-1 (Pancreatic ductal adenocarcinoma)
- ASB for transcription factors
- BACH1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BACH1_HUMAN | 0.34 | 1.94 | 1.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP college completion, ldl cholesterol, obesity with early age of onset (age >2), total cholesterol
GTEx eQTL Brain_Caudate_basal_ganglia, Brain_Cortex, Brain_Nucleus_accumbens_basal_ganglia, Brain_Putamen_basal_ganglia, Colon_Sigmoid, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Liver, Nerve_Tibial, Thyroid