rs10211846 chr20:53814929 A>C
- Sequence
acaaaagaggtgtgatctgagaga[A/C]caaaatagaaacccctatattgac
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- TBX21_HUMAN MEF2B_HUMAN NFAC3_HUMAN NFXL1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TBX21_HUMAN | n/a | 3.39 | 1.50 | n/a | No Hit | |||
| MEF2B_HUMAN | n/a | 3.38 | 2.00 | 6.01 | Concordant | |||
| NFAC3_HUMAN | -3.05 | 3.41 | 1.00 | n/a | No Hit | |||
| NFXL1_HUMAN | 2.84 | n/a | 3.00 | n/a | n/a | |||
| RELB_HUMAN | -2.35 | 2.66 | 1.00 | n/a | No Hit |
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Motif analysis
