rs10215459 chr7:86406974 G>A
- Sequence
agatatatttggtaaaagtatgac[G/A]tcatgcaaataaaaagcaccagat
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- ATF3_HUMAN ATF7_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF3_HUMAN | 3.08 | -3.07 | 1.00 | -0.31 | Weak Concordant | |||
| ATF7_HUMAN | 2.62 | -2.34 | 1.00 | -1.40 | Weak Concordant |
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Motif analysis
Genetic associations
GRASP bipolar disorder, college completion, crohns disease, hdl cholesterol, irritible bowel syndrome, major depressive disorder, panic disorder, total cholesterol, years of education