rs10215696 chr7:121435210 G>C
- Sequence
caaagggagaaagaggataataaa[G/C]aattgtacaataaaagaaagaaca
- ASB in cell types
- LNCaP (prostate carcinoma) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN A2NVP9_HUMAN TBP_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | -1.51 | 3.42 | 1.81 | n/a | No Hit | |||
| FOXA1_HUMAN | -1.20 | 2.54 | 1.50 | 4.40 | Concordant | |||
| A2NVP9_HUMAN | -2.06 | 2.35 | 1.50 | n/a | n/a | |||
| TBP_HUMAN | -1.01 | 1.92 | 2.00 | n/a | No Hit |
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Motif analysis
