rs10218712 chr1:41366625 T>G

Sequence
cacgcggcgggagaggagggggcc[T/G]ggaggcagacagaccgacagacag
ASB in cell types
MS-1 (Small cell lung carcinoma) LNCaP C4-2B (prostate carcinoma) brain prefrontal cortex region tissues
ASB for transcription factors
OLIG2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
OLIG2_HUMAN 2.17 1.05 0.040.30 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

EMBL-EBI general cognitive ability,  schizophrenia
GTEx eQTL Adrenal_Gland,  Artery_Aorta,  Artery_Tibial,  Breast_Mammary_Tissue,  Cells_Cultured_fibroblasts,  Heart_Atrial_Appendage,  Liver,  Lung,  Nerve_Tibial,  Pancreas,  Spleen,  Stomach,  Thyroid

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