rs10221448 chr19:15098232 T>G
- Sequence
ctgggatgtcaatcctccctttgt[T/G]tggcacatctgcactgtaaacacc
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- FOXA2_HUMAN SOX5_HUMAN FOXP1_HUMAN CEBPG_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA2_HUMAN | 1.41 | -0.33 | 1.50 | n/a | No Hit | |||
| SOX5_HUMAN | 2.54 | -2.19 | 1.00 | -2.95 | Concordant | |||
| FOXP1_HUMAN | 2.59 | -2.46 | 1.00 | n/a | No Hit | |||
| CEBPG_HUMAN | 1.77 | -1.56 | 1.00 | n/a | No Hit |
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Motif analysis
