rs10224497 chr7:2110332 A>G
- Sequence
cctcggtacacagcaggcacaacc[A/G]agcgagcagctgcccggctgctcc
- ASB in cell types
- K562 (myelogenous leukemia) HeLa (cervical adenocarcinoma)
- ASB for transcription factors
- INT11_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| INT11_HUMAN | -0.86 | 2.50 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP acute lung injury following major trauma, bipolar disorder, bipolar disorder and schizophrenia, obesity with early age of onset (age >2), schizophrenia, testicular germ cell tumor, urinary albumin-to-creatinine ratio
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Coronary, Artery_Tibial, Brain_Caudate_basal_ganglia, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Cortex, Brain_Hypothalamus, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Lung, Muscle_Skeletal, Nerve_Tibial, Pancreas, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Small_Intestine_Terminal_Ileum, Spleen, Testis, Thyroid, Whole_Blood