rs10224734 chr7:33895464 T>C

Sequence
gctgcaaccggggctgtgcttctc[T/C]ggcggtcccagtgctgccacctac
ASB in cell types
A549 (lung carcinoma) T47D (invasive ductal carcinoma) SK-MEL-147 (melanoma)
ASB for transcription factors
SMC3_HUMAN TIF1B_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMC3_HUMAN 1.52 0.37 6.4·10-31.00 1.80 n/a n/a
TIF1B_HUMAN 0.07 2.66 1.000.04 1.67 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP mitral annular calcium
GTEx eQTL Artery_Tibial Brain_Cortex Brain_Frontal_Cortex_BA9

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