rs10226198 chr7:65820582 G>T
- Sequence
gccagaggagcaaagagatagagg[G/T]agtgaagcaggcgaggaggccagg
- ASB in cell types
- Ishikawa (endometrial adenocarcinoma) GM02610 (Lymphoblastoid Cell Lines) GM19238 (female B-cells lymphoblastoid cell lines) PFSK1 (primitive neuroectodermal tumor)
- ASB for transcription factors
- REST_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| REST_HUMAN | 2.17 | -0.00 | 1.36 | n/a | No Hit | |||
| CTCF_HUMAN | 1.26 | 0.36 | 1.30 | n/a | No Hit |
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