rs10226454 chr7:98286373 C>A
- Sequence
ccactttcactgcaggactggagt[C/A]gccttaagggagtgctcttggaat
- ASB in cell types
- K562 (myelogenous leukemia) MDM(monocyte derived macrophages)
- ASB for transcription factors
- NCOA2_HUMAN TF65_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NCOA2_HUMAN | -2.99 | 3.05 | 1.00 | n/a | n/a | |||
| TF65_HUMAN | 2.11 | n/a | 2.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Esophagus_Muscularis, Muscle_Skeletal, Nerve_Tibial, Skin_Sun_Exposed_Lower_leg, Stomach, Thyroid, Whole_Blood