rs10229725 chr7:112939865 A>G

Sequence
gcagcagccagaggaggcagagga[A/G]ccggagcgacagccttggaggtgg
ASB in cell types
adult erythroblasts CD14+ monocytes
ASB for transcription factors
RBBP5_HUMAN STAT1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RBBP5_HUMAN 3.21 n/a 5.9·10-41.00 2.00 n/a n/a
STAT1_HUMAN 2.72 0.28 9.3·10-41.00 1.67 -2.49 Concordant
Items per page:
1 – 2 of 2

Motif analysis

STAT1_HUMAN Concordant
STAT1_HUMAN pic

Genetic associations

GRASP 2 hour glucose,  advanced age-related macular degeneration (geographic atrophy),  homa-b,  ldl cholesterol
GTEx eQTL Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Whole_Blood

Download