rs10232515 chr7:16397761 G>T

Sequence
tgacgcgaatgacacgattggcac[G/T]tgattggcacgtgaccaacacgtc
ASB in cell types
A549 (lung carcinoma)
ASB for transcription factors
USF2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
USF2_HUMAN n/a 0.93 1.000.01 2.00 -0.94 Weak Discordant
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Motif analysis

USF2_HUMAN Weak Discordant
USF2_HUMAN pic

Genetic associations

GRASP total cholesterol
GTEx eQTL Adipose_Visceral_Omentum Artery_Tibial Brain_Caudate_basal_ganglia Cells_Cultured_fibroblasts Esophagus_Muscularis Nerve_Tibial Pituitary Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Thyroid

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