rs10234832 chr7:30564175 T>C

Sequence
atgcgtgggtttttgcctgtctca[T/C]attccttgcttgagtaagcttcct
ASB in cell types
GM19099 (female B-cells Lymphoblastoid Cell Lines)
ASB for transcription factors
STAG1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAG1_HUMAN -0.61 1.88 1.005.4·10-3 1.25 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP parkinsons disease,  total cholesterol
GTEx eQTL Adipose_Subcutaneous,  Artery_Tibial,  Cells_EBV-transformed_lymphocytes,  Colon_Transverse,  Esophagus_Mucosa,  Lung,  Muscle_Skeletal,  Nerve_Tibial,  Pituitary,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Thyroid,  Whole_Blood

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