rs10236222 chr7:5396737 T>C
- Sequence
gctacctcctttaaggccctgtgt[T/C]gtgagcactgtttacagggggcat
- ASB in cell types
- primary B-CLL cells A549 (lung carcinoma) GM12878 (female B-cells lymphoblastoid cell line) gastroesophageal sphincter
- ASB for transcription factors
- BRD4_HUMAN RAD21_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| BRD4_HUMAN | 2.21 | 0.06 | 1.33 | n/a | n/a | |||
| RAD21_HUMAN | 0.10 | 1.21 | 1.78 | n/a | n/a | |||
| CTCF_HUMAN | 0.40 | 1.01 | 1.43 | n/a | No Hit |
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