rs10237224 chr7:150765816 G>T
- Sequence
cgaagggaaagaaaaacaaggatc[G/T]gaacacacagaagaacaaatattc
- ASB in cell types
- LNCaP (prostate carcinoma) VCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 2.50 | -0.29 | 1.60 | 1.99 | Weak Discordant | |||
| ANDR_HUMAN | 1.96 | -0.43 | 1.60 | 0.55 | Weak Discordant |
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Motif analysis
Genetic associations
GTEx eQTL Cells_Cultured_fibroblasts, Muscle_Skeletal, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Thyroid, Whole_Blood