rs10239366 chr7:129095402 A>G
- Sequence
gatggcgtggaagacactacagag[A/G]caggaagtggtaacagttccattt
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) germinal center B-cells Jurkat (T-cells) CTV-1 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- SPI1_HUMAN SRF_HUMAN ELF1_HUMAN NFAC3_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 1.38 | 0.22 | 1.50 | -0.21 | Weak Concordant | |||
| SRF_HUMAN | 3.33 | -3.21 | 1.00 | n/a | No Hit | |||
| ELF1_HUMAN | 2.79 | -0.90 | 1.67 | 0.07 | Weak Discordant | |||
| NFAC3_HUMAN | 2.95 | -2.83 | 1.00 | n/a | No Hit | |||
| ZNF24_HUMAN | 3.16 | n/a | 2.00 | n/a | No Hit |
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Motif analysis
