rs10242668 chr7:75612275 G>A

Sequence
tgtaatcccagcactttgggaggc[G/A]gaggtgggcggatcacccaaagtc
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
ZFX_HUMAN ESR1_HUMAN CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZFX_HUMAN -0.88 2.44 1.007.5·10-4 1.00 n/a No Hit
ESR1_HUMAN -1.30 2.06 1.000.02 1.33 n/a No Hit
CTCF_HUMAN 2.34 n/a 0.051.00 2.00 n/a No Hit
Items per page:
1 – 3 of 3

Motif analysis

No data available

Genetic associations

GTEx eQTL Skin_Sun_Exposed_Lower_leg

Download