rs10265 chr7:139341406 T>G
- Sequence
acaatggcggccttagggtccccg[T/G]cgcacacttttcgaggacttctgc
- ASB in cell types
- K562 (myelogenous leukemia) adult erythroblasts breast tumor tibial artery
- ASB for transcription factors
- ESR1_HUMAN NELFA_HUMAN BRCA2_HUMAN RBBP5_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 2.71 | -1.91 | 2.00 | n/a | No Hit | |||
| NELFA_HUMAN | -2.29 | 1.41 | 1.50 | n/a | n/a | |||
| BRCA2_HUMAN | 0.79 | -0.48 | 1.00 | n/a | n/a | |||
| RBBP5_HUMAN | 1.48 | 0.37 | 2.00 | n/a | n/a | |||
| KAT5_HUMAN | -1.98 | 1.97 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Tibial, Brain_Anterior_cingulate_cortex_BA24, Brain_Cerebellar_Hemisphere, Brain_Frontal_Cortex_BA9, Brain_Nucleus_accumbens_basal_ganglia, Brain_Putamen_basal_ganglia, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Cells_EBV-transformed_lymphocytes, Colon_Transverse, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Left_Ventricle, Lung, Minor_Salivary_Gland, Muscle_Skeletal, Nerve_Tibial, Pancreas, Pituitary, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Stomach, Testis, Thyroid, Whole_Blood