rs10338 chr17:75777025 G>A

Sequence
aacttttgagaaagcaattttaat[G/A]gggtataactttaagcagttgcta
ASB in cell types
22RV1 (prostate carcinoma)

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
22RV1 (prostate carcinoma) -1.21 2.08 1.000.03 2.00
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol,  partial epilepsy,  waist hip ratio
GTEx eQTL Adipose_Subcutaneous,  Brain_Cerebellar_Hemisphere,  Breast_Mammary_Tissue,  Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Liver,  Lung,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Spleen,  Thyroid

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